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From storms to warming seas: a long-term metabarcoding survey reveals seasonal dynamics and genetic resilience of non-indigenous species in port communities

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This study explores the seasonal dynamics and genetic resilience of non-indigenous species (NIS) in port communities through a comprehensive five-year metabarcoding survey in a northwestern Mediterranean port. By analyzing 2,190 metazoan Molecular Operational Taxonomic Units (MOTUs), including 75 NIS, researchers uncovered significant seasonal patterns in community composition and structure. The findings reveal that despite their limited species richness, NIS exert a substantial influence on community dynamics, exhibiting high genetic diversity and resilience.
From storms to warming seas: a long-term metabarcoding survey reveals seasonal dynamics and genetic resilience of non-indigenous species in port communities

The recent study detailing the long-term metabarcoding survey conducted in a northwestern Mediterranean port shines a critical spotlight on the dynamics of non-indigenous species (NIS) within these vital marine ecosystems. As ports serve as major conduits for the introduction and spread of NIS, understanding their ecological and genetic trajectories is essential for effective management and conservation efforts. This research, which identified a staggering 2,190 metazoan Molecular Operational Taxonomic Units (MOTUs), including 75 NIS, underscores the complexity of biological interactions in port communities. It brings to mind findings from related studies, such as the Islands of biodiversity created by remote Arctic kelp forests of the central Kitikmeot Sea that highlight the intricate relationships between species and their environments, ultimately reminding us of the delicate balance of marine biodiversity.

The study's emphasis on long-term temporal monitoring offers significant insights into how NIS adapt and thrive in fluctuating environments. Notably, the research revealed that, despite constituting only 3.4% of the total species richness, NIS accounted for approximately 26% of total read abundance. This discrepancy illustrates their pronounced influence on community structures. Furthermore, the observation that NIS demonstrated greater genetic diversity and haplotypic richness compared to native species suggests an adaptability that could complicate management strategies. By integrating genetic diversity metrics into marine biomonitoring assessments, we can enhance our understanding of how these species persist in disturbed environments, a concept that resonates with the findings from the Giant squid discovery uncovers a hidden deep-sea world off Australia, where the resilience of species in extreme conditions presents a fascinating parallel.

The implications of this research extend beyond academic curiosity; they have tangible consequences for biodiversity management and biosecurity strategies. The study highlights the role of genetic variability in the success of NIS, suggesting that as these species continue to evolve and adapt, they may increasingly threaten native biodiversity. The marked decline of NIS abundance following the 2020 Gloria storm indicates that environmental disturbances can have immediate and profound effects on community dynamics. As we strive for effective biosecurity measures, recognizing the potential of storms and other ecological events to disrupt these dynamics becomes paramount.

As we look to the future, the question remains: how can we leverage this knowledge to formulate proactive management strategies that prioritize the resilience of native ecosystems? The data presented in this study serve as a clarion call for enhanced monitoring and adaptive management frameworks. Understanding the genetic and ecological dynamics of NIS will not only inform our strategies for mitigating their impacts but also foster a collaborative approach to ocean stewardship. It is through such concerted efforts that we can hope to preserve the integrity of marine ecosystems in an era marked by climate change and increasing human activity. The urgency of this task cannot be overstated, as the health of our oceans directly correlates with the viability of life on Earth itself.

Ports are key gateways for the introduction and spread of non-indigenous species (NIS), yet the ecological and genetic temporal dynamics of these introductions remain poorly understood. Long term temporal monitoring is essential to unravel invasion processes, anticipate biodiversity shifts, and inform effective management and biosecurity strategies. In this study, we conducted a five-year (2019-2024) monthly metabarcoding survey in a northwestern Mediterranean port using artificial collectors. By sequencing a fragment of the Cytochrome Oxidase I gene, we identified 2,190 metazoan Molecular Operational Taxonomic Units (MOTUs), including 75 NIS, while another 338 MOTUs were identified as native species. In addition, we examined both interspecific temporal patterns and intraspecific trends of genetic diversity over time. A strong seasonal component was detected in community composition and structure, both for the whole dataset and for the NIS and native species datasets. Although NIS accounted for only 3.4% of total species richness, they represented ca. 26% of total read abundance, underscoring their strong influence on community structure. Interestingly, NIS had a significantly more homogeneous species composition through time than native species. In 2020, the passage of the Gloria storm reshaped community dynamics, triggering a temporary rise in species richness and MOTU counts, likely due to an influx of native taxa, and a marked decline in NIS abundance. Genetic analyses revealed that NIS exhibited higher haplotypic diversity and lower genetic differentiation than native taxa, suggesting sustained gene flow, potentially facilitated by maritime transport. MOTUs with longer temporal persistence, particularly among NIS, also showed greater intraspecific diversity, supporting the “insurance hypothesis” and highlighting the role of genetic variability in resilience and invasion success. Overall, our findings showed that NIS, despite their low species richness, maintain high abundances, connectivity, and genetic diversity over time. These attributes likely enhance the NIS ability to persist in dynamic and disturbed port environments, and provide key information for understanding the invasion process. This study highlights the need to integrate genetic diversity metrics into marine biomonitoring assessments and management.

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