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Dark carbon fixation in tropical-subtropical lagoon and bay regional intertidal sediments under the effect of vegetation: controlling factors and driving microorganisms

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This study investigates the role of vegetation in dark carbon fixation (DCF) within tropical-subtropical lagoon and bay intertidal sediments, revealing significant insights into sediment organic carbon dynamics. By integrating biogeochemical assays and molecular techniques, we identified key microbial communities and their associated Calvin-Benson-Bassham cycle genes. Results demonstrate that vegetation, particularly seagrass and mangroves, influences sediment inorganic carbon distribution and DCF rates. These findings enhance our understanding of coastal blue carbon ecosystems, underscoring the need for targeted ecosystem conservation strategies.
Dark carbon fixation in tropical-subtropical lagoon and bay regional intertidal sediments under the effect of vegetation: controlling factors and driving microorganisms

The recent study on dark carbon fixation (DCF) in intertidal sediments of tropical and subtropical lagoons illuminates a critical yet often overlooked aspect of coastal blue carbon ecosystems. As coastal areas continue to face mounting pressures from climate change and anthropogenic activities, understanding the role of sediment chemoautotrophs in carbon cycling is essential. The research findings indicate that while vegetated areas such as mangroves and seagrass beds are recognized as major carbon sources, the contribution of DCF to sediment organic carbon (SOC) is significant, particularly in these biodiverse ecosystems. This insight aligns with findings in related studies, such as the investigation into biochar-mediated polycyclic aromatic hydrocarbon contamination remediation: trends and frontiers, which emphasizes the importance of ecosystem management in mitigating environmental challenges.

The study's integration of sediment biogeochemical assays and advanced microbial community analyses provides a comprehensive understanding of how vegetation types influence DCF rates and microbial diversity. The results show that the presence of vegetation, particularly in rhizosphere sediments, significantly affects the inorganic carbon content, underscoring the importance of vegetation in regulating carbon dynamics. Interestingly, the research found that mixed seagrass habitats, while enhancing SOC storage, suppressed the abundance of key genes related to the Calvin-Benson-Bassham (CBB) cycle. This complex interplay highlights the need for targeted conservation strategies that consider not only the biomass of vegetation but also its composition and the microbial communities it supports.

The implications of these findings extend beyond academic interest; they underscore the urgent need for precise ecosystem conservation and blue carbon management. As highlighted in another related article on the study of harmful algal blooms, the health of coastal ecosystems is intricately linked to broader environmental stability and resilience. The reduction of anthropogenic interference as indicated in the study is a crucial factor for maintaining the DCF potential of vegetated sediments. This insight prompts us to consider how human activities influence carbon storage in coastal ecosystems and the broader implications for climate change mitigation.

Looking ahead, the challenge remains: how can we integrate these scientific insights into actionable policies that promote sustainable coastal management? As we seek to enhance our understanding of the factors driving DCF, it is essential to prioritize collaborative efforts between scientists, policymakers, and local communities. The fate of our coastal ecosystems and their capacity to sequester carbon may hinge on our ability to foster this collaboration. By advancing our understanding of the interplay between vegetation, microbial processes, and carbon cycling, we can better inform strategies that not only protect but also restore these vital ecosystems. As we continue to explore these dimensions, the question remains: will we take the necessary steps to harness the potential of these ecosystems in our fight against climate change?

Coastal blue carbon ecosystems dominated by mangroves, salt marshes and seagrass beds are conventionally recognized as major carbon sources. Dark carbon fixation (DCF) by sediment chemoautotrophs also substantially contributes to sediment organic carbon (SOC), particularly in tropical and subtropical zones. But how vegetation types and regional differences could affect DCF remains poorly understood. Here, we integrated sediment biogeochemical assays, 16S rRNA amplicon sequencing, PCR and qPCR analyses to investigate microbial communities and Calvin-Benson-Bassham (CBB) cycle key genes (cbbL and cbbM) in rhizosphere and non-rhizosphere sediments across two tropical lagoons (Li’an Port, Xincun Bay) and one subtropical semi-enclosed bay (Tieshan Port). Our results revealed that the sediment inorganic carbon (SIC) content reached 13.42 g kg-1 in seagrass and mangrove rhizosphere sediments, significantly higher than 1.48 g kg-1 in non-rhizosphere sediments (one way ANOVA, P < 0.05), while SOC contents showed no significant discrepancy (0.68 vs 0.73 g kg-1, one way ANOVA, P > 0.05), suggesting vegetation strongly regulates SIC distribution. The dark carbon fixation rate ranged from 0.31 to 0.72 mmol C m-2 d-1 in surface rhizosphere sediments and 0.46 to 0.69 mmol C m-2 d-1 in non-rhizosphere areas, with no statistical difference between the two habitats (one way ANOVA, P > 0.05). Sulfur-oxidizing Proteobacteria were the primary chemoautotrophs within our sampling results. γ-Proteobacteria carrying cbbL dominated lagoon environments, while α- and β-Proteobacteria associated with cbbM prevailed in Tieshan Port. In lagoon rhizosphere sediments, cbbL abundance showed stronger environmental correlations than cbbM, and such difference was absent in bays and unvegetated regions. Mixed seagrass beds increased SOC storage relative to single-species habitats but suppressed cbbL and cbbM abundance. Moreover, anthropogenic interference notably lowered sediment cbbM abundance and weakened the DCF potential of vegetated sediments. This study clarifies DCF patterns and driving factors in tropical-subtropical coastal regions, providing theoretical support for precise ecosystem conservation and blue carbon management.

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#environmental DNA#ecosystem health#dark carbon fixation#tropical-subtropical#coastal blue carbon#sediment chemoautotrophs#sediment organic carbon#Calvin-Benson-Bassham cycle#cbbL#cbbM#mangroves#seagrass beds#microbial communities#rhizosphere sediments#inorganic carbon#Sulfur-oxidizing Proteobacteria#biogeochemical assays#PCR#qPCR#sediment biogeochemistry